First results look more than promising:
It was only one iteration so I need to do more rigorous scalability testing during next week, but with my hardware it is almost linear scaling for this small system ...
Sunday, 2 November 2008
GROMACS 4.0 scaling for short coarse-grained simulation
During this weekend I had only time to install Gromacs 4.0 and again run short (20ns) coarse-grained MD simulations with very similar (but not exactly same) system as with Gromacs 3.3.3 for one, two, four and eight cores.
First results look more than promising:
It was only one iteration so I need to do more rigorous scalability testing during next week, but with my hardware it is almost linear scaling for this small system ...
First results look more than promising:
It was only one iteration so I need to do more rigorous scalability testing during next week, but with my hardware it is almost linear scaling for this small system ...
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